Clostridioides difficile

One-Sentence Definition

Clostridioides difficile is a spore-forming, toxin-producing anaerobic Gram-positive bacillus that causes antibiotic-associated diarrhoea and colitis when the gut microbiota is disrupted.

Taxonomy & Morphology

  • Gram-positive bacillus, obligate anaerobe, forms endospores (formerly Clostridium difficile)
  • Spores survive alcohol, drying, and most routine disinfectants — the key control problem

Virulence Highlights

  • Toxin A (TcdA) and Toxin B (TcdB) — glucosylate Rho GTPases → cytoskeletal collapse, tight-junction loss, inflammation
  • Binary toxin (CDT) in hypervirulent lineages (e.g., ribotype 027) associated with more severe disease
  • Toxin production is regulated by tcdC and nutrient sensing; carriage without toxin production is common and should not be treated

Pathogenesis

Antibiotic exposure destroys colonization resistance in the Human Microbiome — particularly the loss of secondary bile acid production — allowing spore germination and outgrowth. Highest-risk agents: clindamycin, fluoroquinolones, and broad-spectrum cephalosporins.

Clinical Syndromes

  • Watery diarrhoea with abdominal pain and leukocytosis
  • Pseudomembranous colitis on endoscopy
  • Severe: toxic megacolon, perforation, ileus (diarrhoea may stop — a dangerous sign)
  • Recurrence in ~20–25% after a first episode, rising with each recurrence

Diagnosis

Two-step algorithm, and only test diarrhoeal stool

A sensitive screen (GDH antigen or PCR for tcdB) followed by a specific toxin EIA. NAAT alone cannot distinguish colonization from disease, so testing formed stool generates false “cases” and unnecessary treatment — a classic diagnostic stewardship failure.

Treatment

  • Oral vancomycin or fidaxomicin first-line; metronidazole now reserved for resource-limited settings
  • Stop the inciting antibiotic where possible
  • Recurrent disease: fidaxomicin, bezlotoxumab, or faecal microbiota transplantation — high efficacy for multiply recurrent infection

Infection Control

Alcohol hand rub does not kill spores

Soap and water plus contact precautions and a sporicidal (chlorine-based) environmental agent. See Infection Prevention and Control.

AMR / Stewardship Relevance

C. difficile rate is a standard outcome metric for Antimicrobial Stewardship programmes — it measures the collateral damage of antibiotic use rather than resistance itself.

Active Recall Questions

  1. Why is testing formed stool for C. difficile harmful?
  2. Which microbiota function is lost that permits germination?
  3. Why is alcohol gel inadequate here?

Connections